IRS Notice of Deficiency attorney at Brotman Law

IRS Dispute Resolution

IRS Notice of Deficiency
90 Days to Act. The Clock Is Ticking.

A Notice of Deficiency is the IRS's formal proposal to increase your tax. You have exactly 90 days to petition the Tax Court — miss this deadline and the tax becomes final.

Sam BrotmanSam Brotman, J.D., LL.M.|Last updated April 2026

Key Takeaway

An IRS Notice of Deficiency (also called a 90-day letter) is a formal legal document proposing additional tax and giving you exactly 90 days (150 days if mailed to a foreign address) to petition the U.S. Tax Court. Missing this deadline means you lose your right to challenge the assessment in court before paying. Call Brotman Law at (619) 378-3138 immediately if you have received a Notice of Deficiency — timing is critical.

The IRS Notice of Deficiency Is the Most Deadline-Critical Document in Tax Law

A Notice of Deficiency — commonly called a "90-day letter" — is a formal legal document the IRS sends via certified mail when it proposes to assess additional tax against you. It is the culmination of an examination or audit process, and it gives you a specific legal right: the ability to petition the United States Tax Court to dispute the proposed assessment before paying a single dollar.

This right is absolute, but it is time-limited. You have exactly 90 days from the date the notice is mailed (150 days if you are outside the United States) to file a petition with the Tax Court. If you miss this deadline by even one day, you lose the right to challenge the IRS in Tax Court without first paying the tax. There are almost no exceptions to this deadline.

In our practice, the 90-day letter is the most time-sensitive document in tax law. Miss the 90-day window and you lose your right to petition Tax Court — your only pre-payment judicial review option. We have had clients come to us on day 88. Two days made the difference between a $200,000 assessment becoming final and getting the case into Tax Court where we ultimately negotiated an 80% reduction.

What the Notice of Deficiency Contains

The Notice of Deficiency identifies the tax year or years at issue, the amount of additional tax the IRS proposes, and the specific adjustments the IRS made to your return. It also includes a "statutory notice" cover page explaining your right to petition the Tax Court. The IRS is required to send this notice to your last known address, which is typically the address on your most recently filed return or the address you provided in a Form 8822.

Common situations that trigger a Notice of Deficiency include: unreported income identified through information matching, disallowed deductions or credits from an audit, changes from an IRS examination that you did not agree to, adjustments from a partnership or S corporation audit that flow through to your individual return, and proposed penalties assessed in connection with an examination.

We have found that many Notices of Deficiency contain errors — incorrect income amounts, disallowed deductions the taxpayer can substantiate, or computational mistakes. The IRS is not infallible. A careful line-by-line review of the notice against the taxpayer's actual records frequently reveals adjustable items. In roughly half the cases we handle, we identify at least one IRS error that reduces the proposed assessment.

Why the 90-Day Deadline Is So Critical

The 90-day deadline is a jurisdictional requirement. The Tax Court literally does not have the authority to hear your case if the petition is filed one day late. This is not a procedural technicality that can be waived — it is a hard jurisdictional bar. Courts have consistently held that late-filed petitions must be dismissed, regardless of the reason for the delay.

If you miss the deadline, your only option to challenge the assessment is to pay the tax in full (or at least the portion at issue), file a claim for refund, wait for the IRS to deny it, and then sue in the United States District Court or the Court of Federal Claims. This is called the "pay first, litigate later" path, and it is far more expensive and difficult than Tax Court litigation.

How We Handle Notices of Deficiency

When you receive a Notice of Deficiency, time is of the essence. At Brotman Law, we immediately review the notice and the underlying examination workpapers, evaluate the merits of each IRS adjustment, and determine whether to petition the Tax Court or pursue other resolution options. In many cases, we can negotiate a settlement with IRS counsel after the petition is filed, achieving a better result than accepting the proposed assessment. In other cases, we prepare the case for trial before a Tax Court judge.

What most attorneys do not tell you: even after you petition Tax Court, the IRS Appeals office will contact you to try to settle before trial. In our experience, the vast majority of docketed cases settle at the Appeals level. Filing the petition is often the strategic move that forces the IRS to negotiate seriously — once the case is docketed, the IRS faces the cost and uncertainty of litigation, and their settlement posture shifts dramatically in the taxpayer's favor.

Our Deficiency Services

How We Defend Against IRS Deficiency

Emergency Petition Filing

When deadlines are imminent, we prepare and file Tax Court petitions on an expedited basis to preserve your right to contest the IRS assessment.

Examination Review & Analysis

We obtain and review the IRS examination workpapers, identify errors in the IRS's analysis, and build the factual record for your defense.

Tax Court Representation

We represent you before the United States Tax Court, from initial petition through settlement negotiations, pretrial proceedings, and trial if necessary.

IRS Appeals Negotiation

Many Tax Court cases settle during IRS Appeals. We negotiate with Appeals Officers to achieve favorable settlements without the cost and risk of trial.

Penalty Defense

We challenge accuracy-related, negligence, and substantial understatement penalties asserted in the Notice of Deficiency using reasonable cause and substantial authority defenses.

Innocent Spouse Claims

When the deficiency relates to a joint return and the errors were your spouse's responsibility, we pursue innocent spouse relief in connection with the Tax Court case.

Understanding the Process

Notice of Deficiency Explained

What should I do immediately after receiving a Notice of Deficiency?

First, note the date on the notice (not the date you received it) and count 90 days forward to determine your deadline. Second, do not ignore it or assume someone else will handle it. Third, contact a tax attorney immediately. Fourth, gather all documentation related to the tax year at issue, including your return, supporting records, and any correspondence with the IRS during the examination. Fifth, do not call the IRS examiner to try to resolve the issue — once a statutory notice is issued, the examination is over and your remedy is the Tax Court. Acting quickly gives your attorney the maximum time to evaluate the case, prepare a proper petition, and develop your defense.

How does Tax Court work after filing a petition?

After you file a petition, the case is assigned to an IRS attorney (called a Chief Counsel attorney) rather than the examiner who conducted the audit. The case then goes through several phases: IRS Answer (the IRS responds to your petition), Settlement Negotiation (most cases settle at this stage through negotiation with IRS counsel or referral to IRS Appeals), Discovery (if the case does not settle, both sides exchange documents and information), Pretrial Conference (the judge meets with both sides to narrow the issues), and Trial (if necessary, held before a Tax Court judge). Approximately 80% of Tax Court cases settle before trial. Small tax cases (under $50,000 per year) can be handled through simplified procedures under IRC section 7463.

Can I still negotiate with the IRS after receiving a 90-day letter?

Directly with the examiner, no — the statutory notice closes the examination. However, after you file a Tax Court petition, the case is reassigned to IRS Chief Counsel, and there are multiple opportunities to negotiate. Many cases are referred to IRS Appeals for settlement conferences, where an independent Appeals Officer evaluates the case with a fresh perspective. Settlement rates at this stage are high because both sides want to avoid the cost and uncertainty of trial. Even after trial is calendared, last-minute settlements are common. Filing the petition opens doors that are closed if you simply let the deadline pass.

What if I never received the Notice of Deficiency?

The IRS is required to send the Notice of Deficiency to your last known address. If they sent it to the correct address but you did not actually receive it (for example, you moved and did not update your address with the IRS), the notice is still valid and the 90-day clock still runs. If the IRS sent it to the wrong address and you can prove they had your correct address, the notice may be invalid, and you may have grounds to challenge the assessment. This is a complex area of tax law that requires immediate legal analysis. If you discover a missed Notice of Deficiency, contact a tax attorney immediately to evaluate your options.

What are the costs of Tax Court litigation?

Tax Court litigation costs vary significantly based on the complexity of the case. Simple cases with one or two issues may be resolved through settlement negotiations for $5,000 to $15,000 in legal fees. Complex cases involving multiple issues, expert witnesses, or trial preparation may cost $25,000 to $100,000 or more. Small tax cases (under $50,000 per year) have simplified procedures that reduce costs. The key consideration is that the tax, penalties, and interest at stake often far exceed the cost of representation. We provide clear fee estimates based on your specific case before you commit to representation.

Why Brotman Law

Why Choose Brotman Law for Deficiency Cases

Tax Court Experience

We regularly practice before the United States Tax Court and understand the procedures, deadlines, and strategies that lead to favorable outcomes.

Deadline Protection

The 90-day deadline is absolute. We track deadlines meticulously and file petitions promptly to ensure your rights are preserved.

Settlement Expertise

Most Tax Court cases settle. We have extensive experience negotiating with IRS Chief Counsel and Appeals Officers to achieve optimal settlements.

Comprehensive Case Analysis

We review every IRS adjustment for legal and factual errors, often identifying issues the IRS overlooked or got wrong that significantly reduce the proposed assessment.

Penalty Defense Focus

Penalties often represent a significant portion of the deficiency. We aggressively challenge penalty assertions using reasonable cause, good faith, and substantial authority defenses.

Clear Fee Structure

We provide transparent fee estimates based on your case complexity, so you can make an informed decision about representation before the deadline passes.

Proven Results

The Numbers Behind Our Work

1,500+

Clients Represented

$500M+

In Tax Debt Resolved

25+

Years of Experience

See how we have helped clients just like you. View our results →

Client Testimonials

What Our Clients Say

Real results from real clients who trusted us with their tax problems.

★★★★★

“I almost missed my 90-day deadline. Brotman Law filed an emergency petition with just days to spare and then systematically dismantled the IRS's position. The entire deficiency was eliminated.”
Full Deficiency Eliminated— H.N., Real Estate Developer in Carmel Valley

★★★★★

“The IRS said I owed penalties of $85,000 for a substantial understatement. Sam proved I had reasonable cause and substantial authority for my positions. Every penny of penalties was removed.”
$85K Penalties Removed— W.S., Physician in Solana Beach

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Frequently Asked Questions

IRS Notice of Deficiency FAQs

What is a Notice of Deficiency?

A Notice of Deficiency, also called a 90-day letter, is the IRS's formal proposal to assess additional tax against you. It is sent after an examination or audit and gives you the legal right to petition the United States Tax Court to dispute the proposed assessment before paying.

What is the 90-day deadline and can it be extended?

You have exactly 90 days from the date the notice is mailed (150 days if outside the U.S.) to file a Tax Court petition. This deadline cannot be extended, and the Tax Court has no authority to hear cases where the petition is filed even one day late. There are virtually no exceptions.

Do I have to pay the tax before going to Tax Court?

No. This is the key advantage of Tax Court. You can dispute the IRS assessment without paying first. If you miss the 90-day deadline, your only option is to pay the tax, file a refund claim, and sue in District Court or the Court of Federal Claims.

What if I agree with some adjustments but not others?

You can petition the Tax Court to challenge specific adjustments while conceding others. This is common in multi-issue cases. You can also negotiate with IRS counsel to settle some issues and litigate others. This focused approach reduces costs and allows you to concentrate resources on the strongest arguments.

How long does a Tax Court case take?

Most Tax Court cases are resolved within 12 to 24 months through settlement. Cases that go to trial may take 18 to 36 months from petition to decision. Small tax cases (under $50,000 per year) are often resolved faster through simplified procedures. The timeline depends on case complexity, IRS counsel's caseload, and the court's calendar.

Can I represent myself in Tax Court?

You can represent yourself (pro se), and the Tax Court's small case procedures are designed to be accessible to unrepresented taxpayers. However, for cases involving significant amounts, complex legal issues, or penalties, professional representation significantly increases the likelihood of a favorable outcome. The IRS has experienced attorneys; you should too.

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